Chromatin structure and cellular identity The ability to convert any human cell to other specialised cell types of the body will allow the regeneration of tissues and organs as well as develop personalised therapies. It is now possible to reprogram biopsied human cells to become induced pluripotent stem (iPS) cells, which are very similar to embryonic stem (ES) cells. These cells are pluripotent and can potentially give rise to all cell types of the body. However, this cellular reprogramming method is highly inefficient and relies on the genetic manipulation of factors that have been associated with tumours. We aim to design reprogramming factors that are efficient and safe to use in the clinic. Dr Abdenour Soufi Group Leader Contact details Website: Personal Profile Work: 0131 651 9500 Email: Abdenour.Soufi@ed.ac.uk Aims and areas of interest Image Dr Abdenour Soufi and his research group Our ultimate goal is to design synthetic factors that can convert any cell in the body to a specific cell type of interest. We aim to learn from how the naturally occurring reprogramming factors interact with the genome and other molecules in the cell to change cell types. We are particularly interested in how the reprogramming factors Oct4, Sox2, Klf4, and c-Myc (OSKM) convert fibroblasts to iPS cells. We found that the OSKM factors interact with genome in fibroblasts differently from that in ES cells. We also found that OSKM are initially blocked from accessing large chunks of the fibroblast genome, which are needed for complete reprogramming. Based on these abilities and limitations of the OSKM factors, we are currently establishing new approaches to produce custom-made reprogramming factors in the lab. HTML Group Members Amani Alshaikh (PhD student) Samuel Skoda (PhD student) Wanxuan Dai (MScR Student) Marta Hanzevacki (MScR student) Sonia Yiakoumi (MScR Student) Katharine Furlong (Postdoctoral Research Associate) Funders University of Edinburgh, School of Biological Sciences, Chancellor's Fellowship MRC Career Development Award Darwin Trust of Edinburgh PhD Studentship BBSRC/eastbio PhD Studentship BBSRC/EPSRC/MRC Synthetic Biological Research Centre Diabetes Research & Wellness Foundationhttps://www.ed.ac.uk/human-resources/jobs/chancellors-fellowships Mexico CONACYT PhD Studentship Collaborators Professor Ian Chambers, University of Edinburgh Professor Keisuke Kaji, University of Edinburgh Professor Susan Rosser, The Edinburgh Mammalian Synthetic Biology Research Centre Professor Yossef Buganim, The Hebrew University of Jerusalem Professor Michael G. Poirier, The Ohio State University Professor Kevin Docherty, University of Aberdeen Professor Hans R. Scholer, Max Planck Institute for Molecular Biomedicine, Munster, Germany Professor Ralf Jauch, Guangzhou Institute of Biomedicine and Health, China Professor Martin Taylor, Institute of Genetics and Cancer, University of Edinburgh This article was published on 2024-02-26
